feature_types()
returns different types of gene and genome features. For
feature type definitions, see ?feature_type_definitions
.
Examples
feature_types()
#> [1] "gene"
#> [2] "protein coding gene"
#> [3] "gene segment"
#> [4] "unclassified gene"
#> [5] "heritable phenotypic marker"
#> [6] "other feature types"
#> [7] "QTL"
#> [8] "transgene"
#> [9] "non-coding RNA gene"
#> [10] "lncRNA gene"
#> [11] "antisense lncRNA gene"
#> [12] "lincRNA gene"
#> [13] "sense intronic lncRNA gene"
#> [14] "sense overlapping lncRNA gene"
#> [15] "bidirectional promoter lncRNA gene"
#> [16] "rRNA gene"
#> [17] "tRNA gene"
#> [18] "snRNA gene"
#> [19] "snoRNA gene"
#> [20] "miRNA gene"
#> [21] "scRNA gene"
#> [22] "SRP RNA gene"
#> [23] "RNase P RNA gene"
#> [24] "RNase MRP RNA gene"
#> [25] "telomerase RNA gene"
#> [26] "unclassified non-coding RNA gene"
#> [27] "ribozyme gene"
#> [28] "complex/cluster/region"
#> [29] "cytogenetic marker"
#> [30] "chromosomal deletion"
#> [31] "insertion"
#> [32] "chromosomal inversion"
#> [33] "Robertsonian fusion"
#> [34] "reciprocal chromosomal translocation"
#> [35] "chromosomal translocation"
#> [36] "chromosomal duplication"
#> [37] "chromosomal transposition"
#> [38] "unclassified cytogenetic marker"
#> [39] "BAC/YAC end"
#> [40] "BAC end"
#> [41] "YAC end"
#> [42] "PAC end"
#> [43] "other genome feature"
#> [44] "retrotransposon"
#> [45] "telomere"
#> [46] "minisatellite"
#> [47] "unclassified other genome feature"
#> [48] "endogenous retroviral region"
#> [49] "mutation defined region"
#> [50] "CpG island"
#> [51] "promoter"
#> [52] "promoter flanking region"
#> [53] "TSS region"
#> [54] "enhancer"
#> [55] "CTCF binding site"
#> [56] "transcription factor binding site"
#> [57] "open chromatin region"
#> [58] "DNA segment"
#> [59] "pseudogenic region"
#> [60] "pseudogene"
#> [61] "pseudogenic gene segment"
#> [62] "polymorphic pseudogene"
#> [63] "imprinting control region"
#> [64] "intronic regulatory region"
#> [65] "silencer"
#> [66] "locus control region"
#> [67] "insulator"
#> [68] "response element"
#> [69] "origin of replication"
#> [70] "transcriptional cis regulatory region"
#> [71] "TSS cluster"